Nicholas P Tatonetti: search on Z-Library

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1

Science as a Culinary Art: How Data Science and Informatics Will Change Knowledge Discovery for Everyone

Tatonetti, Nicholas P.

Journal:

Annual Review of Biomedical Data Science

Year:

2018

Language:

english

File:

PDF, 108 KB

english, 2018

2

Artificial Intelligence for Drug Toxicity and Safety

Basile, Anna O., Yahi, Alexandre, Tatonetti, Nicholas P.

Journal:

Trends in Pharmacological Sciences

Year:

2019

Language:

english

File:

PDF, 985 KB

english, 2019

3

Similarity-based modeling in large-scale prediction of drug-drug interactions

Vilar, Santiago, Uriarte, Eugenio, Santana, Lourdes, Lorberbaum, Tal, Hripcsak, George, Friedman, Carol, Tatonetti, Nicholas P

Journal:

Nature Protocols

Year:

2014

Language:

english

File:

PDF, 2.65 MB

english, 2014

4

Mapping the effects of drugs on the immune system

Kidd, Brian A, Wroblewska, Aleksandra, Boland, Mary R, Agudo, Judith, Merad, Miriam, Tatonetti, Nicholas P, Brown, Brian D, Dudley, Joel T

Journal:

Nature Biotechnology

Year:

2015

Language:

english

File:

PDF, 1.81 MB

english, 2015

5

Improving Condition Severity Classification with an Efficient Active Learning Based Framework

Nissim, Nir, Boland, Mary Regina, Tatonetti, Nicholas P, Elovici, Yuval, Hripcsak, George, Shahar, Yuval, Moskovitch, Robert

Journal:

Journal of Biomedical Informatics

Year:

2016

Language:

english

File:

PDF, 1.44 MB

english, 2016

6

Machine learning

Macesic, Nenad, Polubriaginof, Fernanda, Tatonetti, Nicholas P.

Journal:

Current Opinion in Infectious Diseases

Year:

2017

Language:

english

File:

PDF, 243 KB

english, 2017

7

Molecular nephrology: types of acute tubular injury

Desanti De Oliveira, Beatriz, Xu, Katherine, Shen, Tian H., Callahan, Miriam, Kiryluk, Krzysztof, D’Agati, Vivette D., Tatonetti, Nicholas P., Barasch, Jonathan, Devarajan, Prasad

Journal:

Nature Reviews Nephrology (formerly Nature Clinical Practice Nephrology)

Year:

2019

Language:

english

File:

PDF, 2.28 MB

english, 2019

8

An integrative method for scoring candidate genes from association studies: application to warfarin dosing

Nicholas P Tatonetti, Joel T Dudley, Hersh Sagreiya, Atul J Butte, Russ B Altman

Journal:

BMC Bioinformatics

Year:

2010

Language:

english

File:

PDF, 368 KB

english, 2010

9

MAO Inhibitory Activity of 2-Arylbenzofurans versus 3-Arylcoumarins: Synthesis, in vitro Study, and Docking Calculations

Ferino, Giulio, Cadoni, Enzo, Matos, Maria João, Quezada, Elias, Uriarte, Eugenio, Santana, Lourdes, Vilar, Santiago, Tatonetti, Nicholas P., Yáñez, Matilde, Viña, Dolores, Picciau, Carmen, Serra, Sil

Journal:

Year:

2013

Language:

english

File:

PDF, 2.03 MB

english, 2013

10

Novel (coumarin-3-yl)carbamates as selective MAO-B inhibitors: Synthesis, in vitro and in vivo assays, theoretical evaluation of ADME properties and docking study

Matos, Maria J., Vilar, Santiago, Gonzalez-Franco, Rosa Mª, Uriarte, Eugenio, Santana, Lourdes, Friedman, Carol, Tatonetti, Nicholas P., Viña, Dolores, Fontenla, Jose A.

Journal:

European Journal of Medicinal Chemistry

Year:

2013

Language:

english

File:

PDF, 1.31 MB

english, 2013

11

Predicting drug side-effects by chemical systems biology

Tatonetti, Nicholas P, Liu, Tianyun, Altman, Russ B

Journal:

Year:

2009

Language:

english

File:

PDF, 208 KB

english, 2009

12

Genetic variants associated with warfarin dose in African-American individuals: a genome-wide association study

Perera, Minoli A, Cavallari, Larisa H, Limdi, Nita A, Gamazon, Eric R, Konkashbaev, Anuar, Daneshjou, Roxana, Pluzhnikov, Anna, Crawford, Dana C, Wang, Jelai, Liu, Nianjun, Tatonetti, Nicholas, Bourge

Journal:

Year:

2013

Language:

english

File:

PDF, 759 KB

english, 2013

13

Pathway analysis of genome-wide data improves warfarin dose prediction

Roxana Daneshjou, Nicholas P Tatonetti, Konrad J Karczewski, Hersh Sagreiya…

Journal:

Year:

2013

Language:

english

File:

PDF, 716 KB

english, 2013

14

Comparative study of the 3-phenylcoumarin scaffold: Synthesis, X-ray structural analysis and semiempirical calculations of a selected series of compounds

Matos, Maria J., Vilar, Santiago, Tatonetti, Nicholas P., Santana, Lourdes, Uriarte, Eugenio

Journal:

Journal of Molecular Structure

Year:

2013

Language:

english

File:

PDF, 1.21 MB

english, 2013

15

Insight into the Functional and Structural Properties of 3-Arylcoumarin as an Interesting Scaffold in Monoamine Oxidase B Inhibition

Matos, Maria João, Vilar, Santiago, García-Morales, Verónica, Tatonetti, Nicholas P., Uriarte, Eugenio, Santana, Lourdes, Viña, Dolores

Journal:

Year:

2014

Language:

english

File:

PDF, 1.16 MB

english, 2014

16

Monoamine Oxidase (MAO) Inhibitory Activity: 3-Phenylcoumarins versus 4-Hydroxy-3-phenylcoumarins

Delogu, Giovanna L., Serra, Silvia, Quezada, Elias, Uriarte, Eugenio, Vilar, Santiago, Tatonetti, Nicholas P., Viña, Dolores

Journal:

Year:

2014

Language:

english

File:

PDF, 3.80 MB

english, 2014

17

Erratum to: The Weber Effect and the United States Food and Drug Administration’s Adverse Event Reporting System (FAERS): Analysis of Sixty-Two Drugs Approved from 2006 to 2010

Hoffman, Keith B., Dimbil, Mo, Erdman, Colin B., Tatonetti, Nicholas P., Overstreet, Brian M.

Journal:

Year:

2014

Language:

english

File:

PDF, 138 KB

english, 2014

18

The Weber Effect and the United States Food and Drug Administration’s Adverse Event Reporting System (FAERS): Analysis of Sixty-Two Drugs Approved from 2006 to 2010

Hoffman, Keith B., Dimbil, Mo, Erdman, Colin B., Tatonetti, Nicholas P., Overstreet, Brian M.

Journal:

Year:

2014

Language:

english

File:

PDF, 3.94 MB

english, 2014

19

Impact of Major Bleeding on Long-Term Mortality in Anemic Versus Nonanemic Patients Undergoing Percutaneous Coronary Intervention Using Bivalirudin

Ali, Ziad A., Poludasu, Shyam, Qureshi, Yasir H., Krishnan, Prakash, Ali, Ayyaz A., Tatonetti, Nicholas, Downey, Peter, Zalewski, Adrian, Nazif, Tamim, George, Isaac, Mandava, Anupa, Baber, Usman, Dan

Journal:

The American Journal of Cardiology

Year:

2014

Language:

english

File:

PDF, 313 KB

english, 2014

20

Synthesis, pharmacological study and docking calculations of new benzo[ f ]coumarin derivatives as dual inhibitors of enzymatic systems involved in neurodegenerative diseases

Matos, Maria João, Janeiro, Patricia, González Franco, Rosa María, Vilar, Santiago, Tatonetti, Nicholas P, Santana, Lourdes, Uriarte, Eugenio, Borges, Fernanda, Fontenla, José Angel, Viña, Dolores

Journal:

Future Medicinal Chemistry

Year:

2014

Language:

english

File:

PDF, 1.47 MB

english, 2014

21

Insight into the Interactions between Novel Coumarin Derivatives and Human A 3 Adenosine Receptors

Matos, Maria João, Vilar, Santiago, Kachler, Sonja, Fonseca, André, Santana, Lourdes, Uriarte, Eugenio, Borges, Fernanda, Tatonetti, Nicholas P., Klotz, Karl-Norbert

Journal:

Year:

2014

Language:

english

File:

PDF, 1.17 MB

english, 2014

22

Back Cover: Insight into the Interactions between Novel Coumarin Derivatives and Human A 3 Adenosine Receptors (ChemMedChem 10/2014)

Matos, Maria João, Vilar, Santiago, Kachler, Sonja, Fonseca, André, Santana, Lourdes, Uriarte, Eugenio, Borges, Fernanda, Tatonetti, Nicholas P., Klotz, Karl-Norbert

Journal:

Year:

2014

File:

PDF, 1.10 MB

2014

23

3D Pharmacophoric Similarity improves Multi Adverse Drug Event Identification in Pharmacovigilance

Vilar, Santiago, Tatonetti, Nicholas P., Hripcsak, George

Journal:

Scientific Reports

Year:

2015

Language:

english

File:

PDF, 1.23 MB

english, 2015

24

Stimulated Reporting: The Impact of US Food and Drug Administration-Issued Alerts on the Adverse Event Reporting System (FAERS)

Hoffman, Keith B., Demakas, Andrea R., Dimbil, Mo, Tatonetti, Nicholas P., Erdman, Colin B.

Journal:

Year:

2014

Language:

english

File:

PDF, 520 KB

english, 2014

25

Development and validation of a classification approach for extracting severity automatically from electronic health records

Boland, Mary Regina, Tatonetti, Nicholas P, Hripcsak, George

Journal:

Journal of Biomedical Semantics

Year:

2015

Language:

english

File:

PDF, 2.33 MB

english, 2015

26

Toward a complete dataset of drug–drug interaction information from publicly available sources

Ayvaz, Serkan, Horn, John, Hassanzadeh, Oktie, Zhu, Qian, Stan, Johann, Tatonetti, Nicholas P., Vilar, Santiago, Brochhausen, Mathias, Samwald, Matthias, Rastegar-Mojarad, Majid, Dumontier, Michel, Bo

Journal:

Journal of Biomedical Informatics

Year:

2015

Language:

english

File:

PDF, 681 KB

english, 2015

27

Coherent Functional Modules Improve Transcription Factor Target Identification, Cooperativity Prediction, and Disease Association

Karczewski, Konrad J., Snyder, Michael, Altman, Russ B., Tatonetti, Nicholas P., Gibson, Greg

Journal:

Year:

2014

Language:

english

File:

PDF, 887 KB

english, 2014

28

An Integrative Data Science Pipeline to Identify Novel Drug Interactions that Prolong the QT Interval

Lorberbaum, Tal, Sampson, Kevin J., Woosley, Raymond L., Kass, Robert S., Tatonetti, Nicholas P.

Journal:

Year:

2016

Language:

english

File:

PDF, 908 KB

english, 2016

29

A Pharmacovigilance Signaling System Based on FDA Regulatory Action and Post-Marketing Adverse Event Reports

Hoffman, Keith B., Dimbil, Mo, Tatonetti, Nicholas P., Kyle, Robert F.

Journal:

Year:

2016

Language:

english

File:

PDF, 806 KB

english, 2016

30

[IEEE 2015 IEEE International Conference on Data Mining (ICDM) - Atlantic City, NJ, USA (2015.11.14-2015.11.17)] 2015 IEEE International Conference on Data Mining - Outcomes Prediction via Time Intervals Related Patterns

Moskovitch, Robert, Walsh, Colin, Wang, Fei, Hripcsak, George, Tatonetti, Nicholas

Year:

2015

Language:

english

File:

PDF, 243 KB

english, 2015

31

A Computational Drug Repositioning Approach for Targeting Oncogenic Transcription Factors

Gayvert, Kaitlyn M., Dardenne, Etienne, Cheung, Cynthia, Boland, Mary Regina, Lorberbaum, Tal, Wanjala, Jackline, Chen, Yu, Rubin, Mark A., Tatonetti, Nicholas P., Rickman, David S., Elemento, Olivier

Journal:

Year:

2016

Language:

english

File:

PDF, 1.96 MB

english, 2016

32

[WORLD SCIENTIFIC Proceedings of the Pacific Symposium - Kohala Coast, Hawaii, USA (3 – 7 January 2012)] Biocomputing 2012 - INTERPRETOME: A FREELY AVAILABLE, MODULAR, AND SECURE PERSONAL GENOME INTERPRETATION ENGINE

KARCZEWSKI, KONRAD J., TIRRELL, ROBERT P., CORDERO, PABLO, TATONETTI, NICHOLAS P., DUDLEY, JOEL T., SALARI, KEYAN, SNYDER, MICHAEL, ALTMAN, RUSS B., KIM, STUART K.

Language:

english

File:

PDF, 2.85 MB

english

33

Systems biology approaches for identifying adverse drug reactions and elucidating their underlying biological mechanisms

Boland, Mary Regina, Jacunski, Alexandra, Lorberbaum, Tal, Romano, Joseph D., Moskovitch, Robert, Tatonetti, Nicholas P.

Journal:

Wiley Interdisciplinary Reviews: Systems Biology and Medicine

Year:

2016

Language:

english

File:

PDF, 607 KB

english, 2016

34

Predicting G Protein-Coupled Receptor Downstream Signaling by Tissue Expression

Hao, Yun, Tatonetti, Nicholas P.

Journal:

Year:

2016

Language:

english

File:

PDF, 673 KB

english, 2016

35

Prognosis of Clinical Outcomes with Temporal Patterns and Experiences with One Class Feature Selection

Moskovitch, Robert, Choi, Hyunmi, Hripcsak, George, Tatonetti, Nicholas

Journal:

IEEE/ACM Transactions on Computational Biology and Bioinformatics

Year:

2016

Language:

english

File:

PDF, 9.53 MB

english, 2016

36

Coupling Data Mining and Laboratory Experiments to Discover Drug Interactions Causing QT Prolongation

Lorberbaum, Tal, Sampson, Kevin J., Chang, Jeremy B., Iyer, Vivek, Woosley, Raymond L., Kass, Robert S., Tatonetti, Nicholas P.

Journal:

Journal of the American College of Cardiology

Year:

2016

Language:

english

File:

PDF, 1.04 MB

english, 2016

37

A curated and standardized adverse drug event resource to accelerate drug safety research

Banda, Juan M., Evans, Lee, Vanguri, Rami S., Tatonetti, Nicholas P., Ryan, Patrick B., Shah, Nigam H.

Journal:

Scientific Data

Year:

2016

Language:

english

File:

PDF, 1.50 MB

english, 2016

38

Replicating Cardiovascular Condition-Birth Month Associations

Li, Li, Boland, Mary Regina, Miotto, Riccardo, Tatonetti, Nicholas P., Dudley, Joel T.

Journal:

Scientific Reports

Year:

2016

Language:

english

File:

PDF, 685 KB

english, 2016

39

A novel, rapid method to compare the therapeutic windows of oral anticoagulants using the Hill coefficient

Chang, Jeremy B., Quinnies, Kayla M., Realubit, Ronald, Karan, Charles, Rand, Jacob H., Tatonetti, Nicholas P.

Journal:

Scientific Reports

Year:

2016

Language:

english

File:

PDF, 592 KB

english, 2016

40

Reply

Lorberbaum, Tal, Tatonetti, Nicholas P.

Journal:

Journal of the American College of Cardiology

Year:

2017

Language:

english

File:

PDF, 161 KB

english, 2017

41

[WORLD SCIENTIFIC Proceedings of the Pacific Symposium - Kohala Coast, Hawaii, USA (4 – 8 January 2017)] Biocomputing 2017 - METHODS TO ENSURE THE REPRODUCIBILITY OF BIOMEDICAL RESEARCH

KARCZEWSKI, KONRAD J., TATONETTI, NICHOLAS P., MANRAI, ARJUN K., PATEL, CHIRAG J., TITUS BROWN, C., IOANNIDIS, JOHN P. A.

Language:

english

File:

PDF, 549 KB

english

42

VenomKB, a new knowledge base for facilitating the validation of putative venom therapies

Romano, Joseph D., Tatonetti, Nicholas P.

Journal:

Scientific Data

Year:

2015

Language:

english

File:

PDF, 965 KB

english, 2015

43

Climate Classification is an Important Factor in Assessing Quality-of-Care Across Hospitals

Boland, Mary Regina, Parhi, Pradipta, Gentine, Pierre, Tatonetti, Nicholas P.

Journal:

Scientific Reports

Year:

2017

Language:

english

File:

PDF, 6.13 MB

english, 2017

44

Procedure Prediction from Symbolic Electronic Health Records via Time Intervals Analytics

Moskovitch, Robert, Polubriaginof, Fernanda, Weiss, Aviram, Ryan, Patrick, Tatonetti, Nicholas

Journal:

Journal of Biomedical Informatics

Year:

2017

Language:

english

File:

PDF, 1.34 MB

english, 2017

45

Development of A Machine Learning Algorithm to Classify Drugs Of Unknown Fetal Effect

Boland, Mary Regina, Polubriaginof, Fernanda, Tatonetti, Nicholas P.

Journal:

Scientific Reports

Year:

2017

Language:

english

File:

PDF, 3.77 MB

english, 2017

46

Translational medicine in the Age of Big Data

Tatonetti, Nicholas P

Journal:

Briefings in Bioinformatics

Year:

2017

Language:

english

File:

PDF, 183 KB

english, 2017

47

Tissue-Specific Analysis of Pharmacological Pathways

Hao, Yun, Quinnies, Kayla, Realubit, Ronald, Karan, Charles, Tatonetti, Nicholas P.

Journal:

CPT: Pharmacometrics & Systems Pharmacology

Year:

2018

Language:

english

File:

PDF, 987 KB

english, 2018

48

Ten Simple Rules to Enable Multi-site Collaborations through Data Sharing

Boland, Mary Regina, Karczewski, Konrad J., Tatonetti, Nicholas P.

Journal:

PLoS Computational Biology

Year:

2017

Language:

english

File:

PDF, 897 KB

english, 2017

49

Improving Detection of Arrhythmia Drug-Drug Interactions in Pharmacovigilance Data through the Implementation of Similarity-Based Modeling

Vilar, Santiago, Lorberbaum, Tal, Hripcsak, George, Tatonetti, Nicholas P., Yang, Jinn-Moon

Journal:

Year:

2015

Language:

english

File:

PDF, 2.75 MB

english, 2015

50

Pharmacological inhibition of cystine–glutamate exchange induces endoplasmic reticulum stress and ferroptosis

Dixon, Scott J, Patel, Darpan N, Welsch, Matthew, Skouta, Rachid, Lee, Eric D, Hayano, Miki, Thomas, Ajit G, Gleason, Caroline E, Tatonetti, Nicholas P, Slusher, Barbara S, Stockwell, Brent R

Journal:

Year:

2014

Language:

english

File:

PDF, 1.74 MB

english, 2014